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                                2021-2024 y.Effects of parasite-pollution interactions on aquatic organisms Project leader: Dr. Milda Stankevičiūtė 
 Division: Laboratory of Ecotoxicology
 Source of funding: Research Council of Lithuania
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                                2020-2022 y.Determination of vectors transmitting haemoproteid parasites of diurnal raptors Project leader: Dr. Dovilė Bukauskaitė 
 Division: P. B. Šivickis Laboratory of Parasitology
 Source of funding: Research Council of Lithuania
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                                2020-2022 y.Investigation of factors limiting the spread of avian haemosporidian infections Project leader: Dr. Rita Žiegytė 
 Division: P. B. Šivickis Laboratory of Parasitology
 Source of funding: Research Council of Lithuania
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                                2020-2022 y.Investigation of molecular identification of Sarcocystis species in predator and water samples Project leader: Dr. (HP) Dalius Butkauskas 
 Division: Laboratory of Molecular Ecology
 Source of funding: Research Council of Lithuania
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                                2020-2022 y.Ponto-Caspian amphipods in the Baltic region: niche changes and functional comparison with local species (AMPHIBALT) Project leader: Dr. Denis Copilaş-Ciocianu 
 Division: Laboratory of Evolutionary Ecology of Hydrobionts
 Source of funding: Research Council of Lithuania
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                                2019-2022 y.Innovative diagnostic systems and measures of endobiont Microlepidoptera for the modern consumer Project leader: Prof. Dr. Habil. Jonas Rimantas Stonis 
 Division: Laboratory of Entomology
 Source of funding: Research Council of Lithuania
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                                2020-2022 y.Fish as a model of nutritional ontogenesis for the study of nanoparticle transport by aquatic food chains in the context of climate change Project leader: Dr. Nijolė Kazlauskienė 
 Division: Laboratory of Ecotoxicology
 Source of funding: Research Council of Lithuania
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                                2020-2022 y.Genes affected by natural selection: evolutionary rate during speciation and use for identification of sibling species Project leader: Assoc. Prof. Dr. Eduardas Budrys 
 Division: Laboratory of Chemical and Behavioural Ecology
 Source of funding: Research Council of Lithuania
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                                2017-2020 y.Structure of small mammal parasite communities and intestinal microbiota and their regulation Project leader: Dr. Asta Križanauskienė 
 Division: Laboratory of Mammalian Ecology
 Source of funding: Research Council of Lithuania
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                                2017-2020 y.Holocene paleoenvironmental reconstruction and studies of climate dynamics: spatial and chronological context Project leader: Dr. Miglė Stančikaitė 
 Division: Laboratory of Quaternary Research
 Source of funding: Research Council of Lithuania